MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Shigella flexneri 19428wH2_1568

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NCBI Genome Annotation:

contigs: 237

bases: 5,139,722 bps

CDS: 5,034

rRNA: 13

tRNA: 87

tmRNA: 1

Total number of protein coding genes annotated/found: 4,833

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Molecule ^	PID/GenBank ID *	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5015\|JADGKR010000236.1	MBF0743847.1	NA AA	158/52	158-1	phage tail protein
SEQF5015\|JADGKR010000234.1	MBF0743846.1	NA AA	256/85	256-1	transposase
SEQF5015\|JADGKR010000233.1	MBF0743845.1	NA AA	276/92	15-290	hypothetical protein
SEQF5015\|JADGKR010000232.1	MBF0743844.1	NA AA	357/119	357-1	transposase
SEQF5015\|JADGKR010000231.1	MBF0743843.1	NA AA	379/126	1-380	hypothetical protein
SEQF5015\|JADGKR010000230.1	MBF0743842.1	NA AA	378/126	1-380	efflux RND transporter permease subunit
SEQF5015\|JADGKR010000229.1	MBF0743841.1	NA AA	380/126	1-380	FHIPEP family type III secretion protein
SEQF5015\|JADGKR010000228.1	MBF0743840.1	NA AA	381/127	381-1	TMEM165/GDT1 family protein
SEQF5015\|JADGKR010000227.1	MBF0743839.1	NA AA	297/99	85-381	hypothetical protein
SEQF5015\|JADGKR010000226.1	MBF0743838.1	NA AA	297/99	382-85	ADP-heptose--LPS heptosyltransferase
SEQF5015\|JADGKR010000225.1	MBF0743837.1	NA AA	380/126	382-1	hypothetical protein
SEQF5015\|JADGKR010000224.1	MBF0743836.1	NA AA	259/86	259-1	EscT/YscT/HrcT family type III secretion system export apparatus protein
SEQF5015\|JADGKR010000223.1	MBF0743835.1	NA AA	383/127	384-1	two-component sensor histidine kinase
SEQF5015\|JADGKR010000220.1	MBF0743834.1	NA AA	384/128	1-386	nitrite reductase large subunit
SEQF5015\|JADGKR010000219.1	MBF0743833.1	NA AA	387/129	1-387	S9 family peptidase
SEQF5015\|JADGKR010000218.1	MBF0743832.1	NA AA	385/128	387-1	dynamin family protein
SEQF5015\|JADGKR010000217.1	MBF0743831.1	NA AA	387/129	387-1	acyl-CoA dehydrogenase family protein
SEQF5015\|JADGKR010000216.1	MBF0743830.1	NA AA	287/95	287-1	type VI secretion system tip protein VgrG
SEQF5015\|JADGKR010000215.1	MBF0743829.1	NA AA	388/129	1-389	glycine dehydrogenase (aminomethyl-transferring)
SEQF5015\|JADGKR010000214.1	MBF0743828.1	NA AA	389/129	1-389	GGDEF domain-containing protein

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Page last updated: July 7, 2021 08:39:35